Bioinformaticians face challenges in developing specialized scientific workflows due to managing large files and deploying academic tools.
Snakemake, a Python-based framework, offers advantages over Nextflow in terms of Python readability, debuggability, and configuration simplicity.
LatchBio now provides native support for Snakemake, enabling bioinformaticians to leverage graphical interfaces, managed infrastructure, and downstream analysis solutions.
Developers can easily debug biological code in the cloud from their local environment.
Establishing a tight feedback loop with a production cloud environment is crucial for fast iteration and debugging bioinformatics workflows.
Interactively debugging production cloud environments, dispatching local unit tests to the cloud, and gaining access to essential resources are key elements in enhancing bioinformatics development.